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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808139.1_cds_XP_016495170.1_9512
CDS Infomation

[gene=LOC107814303] [db_xref=GeneID:107814303] [protein=DNA cross-link repair protein SNM1-like] [protein_id=XP_016495170.1] [location=join(13894..14290,14951..15131,15276..15515,15598..15742,16396..16530,16603..16669,16770..16847,17000..17052,17202..17300)] [gbkey=CDS]
Sequence

ATGGAGAAGTGCAAGGAGGGGCGAAAGCTGATGAAAGAGACGGTAATAAGTGATTGTACC
TTTGATGATTTCCATTCGTATTCCGACGACGACGGCGAGAACTGTTTTCAACCCGATAAC
CTTGAGGACGATGAAACAACGCACCATTTGGAATATTCAGAGCAGATATGCTCCTCCAGT
GTTAAGAAGAGAAGACTGACGCAGACGAATCTATTCCAGTCGTGGGGCCTTAAGAATCCT
GCTGACCATGGCAAGAGCAAGAACGTCAAGCAGACGAATCTATTCCAGCTGTGGGGCTTT
GAGAATCCTGGAAAGAGCAAGAGCGTCCAAAAGACCACTACTTCTCTTGCTTCCTGCAAA
AGCCAACGCGTTTGCCCCTTCTATAAGAGGATTCCGGGAACGCCCTTCACTGTTGACGCA
TTTCGCTATGGTCCAGTCAAAGGCTGCTCTGCCTATTTCCTTAGTCACTTCCATGCCGAT
CATTATATTGGCTTGACGAAAGTATGGTCACATGGCCCTATCTACTGTACCAACCTGACT
GCTCGCCTAGTTAGAATCTGTCTTAATGTTAGTCCATCTTTCATCTGTCCTCTGGAACTA
GGTACTGAATACGACCTTAAAGGAATCAAAGTTTCTATGCTTGATGCTAATCACTGTCCT
GGTGCTGCTCTCATTCACTTCCGTCTCCCAAATGGACAATGTTACTTGCACACTGGAGAC
TTTAGGGCTTCGAAGCTGATGCAATCATATCCACTTCTTGCAAGCCAACGTATTAATATA
CTATACCTTGACACAACATATTGCAATCCAAAGTACAGGTTTCCTTCCAAAGAAGAAGTT
TTGAAATTTGTTGTGGGCGTCACGAGAACATATTTGAATAATTATCCAAAAACCATCGTG
GTTGTTGGTGCATACAGCATTGGAAAAGAACATGTGTATTTTGCAATTTCCAAGGCACTC
GGGGTAAAAATATATGCAAATGCTTCCAGGAGGCGCATTCTTCAGTCTTTTGGCTGGGCA
GGAATTTCTGAAAATCTGTCAACAAACAGGAAAGATACACCTTTACACATATTGCCTATA
TCATCCTTGAAATTTGAGATGCTGGAGCGTTATTTGGCATCACAAGACGGACAGTACACT
AGAATGTTGGCATTCCGACCAACAGGTTGGACTTACTCAGAGACCATTGGGGAGAATCTA
AACTTAATAAAACCCACTTCTAAAGGCAACATCACTATTTATGGAGTTCCATATAGTGAG
CATTCTAGTTTCACAGAGCTGCAGGAATTTGTTCAGTTTCTGAGGCCAGAAAAGATAATT
CCTACTGTCAATGTTGGAAATGCTGTATATCGTGAGAAGATGCAATCGTACTTTCAGCAG
TGGCTGAAAGCCTGA

Peptide Sequence

PEP ID

XP_016495170.1
PEP Infomation

PREDICTED: DNA cross-link repair protein SNM1-like [Nicotiana tabacum]
Sequence

MEKCKEGRKLMKETVISDCTFDDFHSYSDDDGENCFQPDNLEDDETTHHLEYSEQICSSS
VKKRRLTQTNLFQSWGLKNPADHGKSKNVKQTNLFQLWGFENPGKSKSVQKTTTSLASCK
SQRVCPFYKRIPGTPFTVDAFRYGPVKGCSAYFLSHFHADHYIGLTKVWSHGPIYCTNLT
ARLVRICLNVSPSFICPLELGTEYDLKGIKVSMLDANHCPGAALIHFRLPNGQCYLHTGD
FRASKLMQSYPLLASQRINILYLDTTYCNPKYRFPSKEEVLKFVVGVTRTYLNNYPKTIV
VVGAYSIGKEHVYFAISKALGVKIYANASRRRILQSFGWAGISENLSTNRKDTPLHILPI
SSLKFEMLERYLASQDGQYTRMLAFRPTGWTYSETIGENLNLIKPTSKGNITIYGVPYSE
HSSFTELQEFVQFLRPEKIIPTVNVGNAVYREKMQSYFQQWLKA

Transcript Sequence

Gene sequence data has not been registered.